Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.65□□□□□ -0.22
Cx3cl1O35188 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.65□□□□□ -0.22
Cx3cl1O35188 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cl1O35188 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm2810-201ENSMUST00000118681 990 ntBASIC13.64□□□□□ -0.23
Cx3cl1O35188 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm9726-201ENSMUST00000180321 678 ntBASIC13.64□□□□□ -0.23
Cx3cl1O35188 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cl1O35188 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm5479-201ENSMUST00000160578 435 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm43474-201ENSMUST00000196415 774 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm2451-201ENSMUST00000199447 999 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm10290-201ENSMUST00000200451 999 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Gm43125-201ENSMUST00000201724 730 ntBASIC13.63□□□□□ -0.23
Cx3cl1O35188 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cl1O35188 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms