Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.27□□□□□ -0.12
Bhlhe40O35185 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.27□□□□□ -0.12
Bhlhe40O35185 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.27□□□□□ -0.12
Bhlhe40O35185 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Gm16476-201ENSMUST00000221544 139 ntBASIC14.27□□□□□ -0.13
Bhlhe40O35185 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.27□□□□□ -0.13
Bhlhe40O35185 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Bhlhe40O35185 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Gm5866-201ENSMUST00000177881 973 ntBASIC14.26□□□□□ -0.13
Bhlhe40O35185 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Bhlhe40O35185 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Gm14719-201ENSMUST00000121891 340 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Gm46209-201ENSMUST00000217912 553 ntBASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Bhlhe40O35185 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms