Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Alx4O35137 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Alx4O35137 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Alx4O35137 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Alx4O35137 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Alx4O35137 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Alx4O35137 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.95□□□□□ -0.34
Alx4O35137 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.95□□□□□ -0.34
Alx4O35137 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Alx4O35137 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC12.95□□□□□ -0.34
Alx4O35137 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Alx4O35137 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.95□□□□□ -0.34
Alx4O35137 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Alx4O35137 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.94□□□□□ -0.34
Alx4O35137 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.94□□□□□ -0.34
Alx4O35137 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Alx4O35137 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gm21362-201ENSMUST00000194272 928 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.94□□□□□ -0.34
Alx4O35137 Gm9182-201ENSMUST00000217829 639 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.94□□□□□ -0.34
Alx4O35137 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Alx4O35137 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.94□□□□□ -0.34
Alx4O35137 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.93□□□□□ -0.34
Alx4O35137 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Gm7230-201ENSMUST00000173026 815 ntBASIC12.93□□□□□ -0.34
Alx4O35137 Gm4899-201ENSMUST00000178708 719 ntBASIC12.93□□□□□ -0.34
Alx4O35137 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms