Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.27■□□□□ 0.36
Hdac1O09106 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.27■□□□□ 0.36
Hdac1O09106 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.27■□□□□ 0.36
Hdac1O09106 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hdac1O09106 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac1O09106 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac1O09106 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC17.27■□□□□ 0.35
Hdac1O09106 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hdac1O09106 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Hdac1O09106 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hdac1O09106 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac1O09106 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hdac1O09106 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hdac1O09106 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Hdac1O09106 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.26■□□□□ 0.35
Hdac1O09106 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Hdac1O09106 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hdac1O09106 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.26■□□□□ 0.35
Hdac1O09106 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.26■□□□□ 0.35
Hdac1O09106 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
Hdac1O09106 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
Hdac1O09106 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hdac1O09106 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Hdac1O09106 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hdac1O09106 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.25■□□□□ 0.35
Hdac1O09106 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Gm9103-201ENSMUST00000119371 405 ntBASIC17.25■□□□□ 0.35
Hdac1O09106 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.25■□□□□ 0.35
Hdac1O09106 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Gm8584-201ENSMUST00000171982 758 ntBASIC17.25■□□□□ 0.35
Hdac1O09106 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.25■□□□□ 0.35
Hdac1O09106 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.25■□□□□ 0.35
Hdac1O09106 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.25■□□□□ 0.35
Hdac1O09106 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Hdac1O09106 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hdac1O09106 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hdac1O09106 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.24■□□□□ 0.35
Hdac1O09106 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Gm45747-201ENSMUST00000212203 999 ntBASIC17.24■□□□□ 0.35
Hdac1O09106 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.24■□□□□ 0.35
Hdac1O09106 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hdac1O09106 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.24■□□□□ 0.35
Hdac1O09106 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.24■□□□□ 0.35
Hdac1O09106 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hdac1O09106 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hdac1O09106 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms