Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trove2O08848 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trove2O08848 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trove2O08848 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trove2O08848 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trove2O08848 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trove2O08848 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trove2O08848 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trove2O08848 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Gm7153-201ENSMUST00000117092 455 ntBASIC14.92□□□□□ -0.02
Trove2O08848 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trove2O08848 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Gm27646-201ENSMUST00000183989 110 ntBASIC14.92□□□□□ -0.02
Trove2O08848 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trove2O08848 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.92□□□□□ -0.02
Trove2O08848 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trove2O08848 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
Trove2O08848 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trove2O08848 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trove2O08848 Celf4-206ENSMUST00000224553 1729 ntBASIC14.92□□□□□ -0.02
Trove2O08848 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trove2O08848 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Trove2O08848 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.91□□□□□ -0.02
Trove2O08848 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Gm6376-201ENSMUST00000209407 580 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.91□□□□□ -0.02
Trove2O08848 Rps4l-201ENSMUST00000071745 943 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.91□□□□□ -0.02
Trove2O08848 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trove2O08848 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trove2O08848 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trove2O08848 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trove2O08848 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trove2O08848 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms