Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Dctn1O08788 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Dctn1O08788 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.85■□□□□ 0.45
Dctn1O08788 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.85■□□□□ 0.45
Dctn1O08788 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Dctn1O08788 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.85■□□□□ 0.45
Dctn1O08788 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.85■□□□□ 0.45
Dctn1O08788 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.85■□□□□ 0.45
Dctn1O08788 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Dctn1O08788 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC17.85■□□□□ 0.45
Dctn1O08788 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Dctn1O08788 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Dctn1O08788 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.84■□□□□ 0.45
Dctn1O08788 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Dctn1O08788 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.84■□□□□ 0.45
Dctn1O08788 Gm8602-201ENSMUST00000184045 607 ntBASIC17.84■□□□□ 0.45
Dctn1O08788 Mir6392-201ENSMUST00000184924 108 ntBASIC17.84■□□□□ 0.45
Dctn1O08788 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Dctn1O08788 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Dctn1O08788 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Dctn1O08788 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dctn1O08788 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dctn1O08788 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dctn1O08788 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dctn1O08788 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Dctn1O08788 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.83■□□□□ 0.44
Dctn1O08788 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Dctn1O08788 Gm33320-201ENSMUST00000192232 530 ntBASIC17.83■□□□□ 0.44
Dctn1O08788 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.83■□□□□ 0.44
Dctn1O08788 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.83■□□□□ 0.44
Dctn1O08788 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.83■□□□□ 0.44
Dctn1O08788 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.83■□□□□ 0.44
Dctn1O08788 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Dctn1O08788 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.83■□□□□ 0.44
Dctn1O08788 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Dctn1O08788 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Dctn1O08788 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.83■□□□□ 0.44
Dctn1O08788 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Dctn1O08788 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Dctn1O08788 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Dctn1O08788 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Dctn1O08788 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Dctn1O08788 Gm12585-201ENSMUST00000117307 290 ntBASIC17.82■□□□□ 0.44
Dctn1O08788 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.82■□□□□ 0.44
Dctn1O08788 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Dctn1O08788 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.82■□□□□ 0.44
Dctn1O08788 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.82■□□□□ 0.44
Dctn1O08788 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Dctn1O08788 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Dctn1O08788 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms