Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm27486-201ENSMUST00000184923 80 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm19078-201ENSMUST00000206311 727 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
B020004C17RikJ3QP07 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Gm11814-201ENSMUST00000119515 929 ntBASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
B020004C17RikJ3QP07 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
B020004C17RikJ3QP07 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm11524-201ENSMUST00000119349 807 ntBASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Mir6420-201ENSMUST00000185032 102 ntBASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm7287-201ENSMUST00000205267 602 ntBASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
B020004C17RikJ3QP07 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 BC037039-201ENSMUST00000192003 2205 ntBASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Gm12957-201ENSMUST00000117835 377 ntBASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Gm13226-201ENSMUST00000117838 404 ntBASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Gm43094-201ENSMUST00000196549 921 ntBASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
B020004C17RikJ3QP07 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms