Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3tc1G3X9F6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Gm4804-201ENSMUST00000182234 999 ntBASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3tc1G3X9F6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Mir7654-201ENSMUST00000185082 70 ntBASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Gm17795-201ENSMUST00000214505 757 ntBASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh3tc1G3X9F6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 BC037039-201ENSMUST00000192003 2205 ntBASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Gm4984-201ENSMUST00000115987 360 ntBASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3tc1G3X9F6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sh3tc1G3X9F6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms