Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm28043E0CXC2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Gm28043E0CXC2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Gm28043E0CXC2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Gm28043E0CXC2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Gm28043E0CXC2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm28043E0CXC2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm10499-201ENSMUST00000174094 934 ntBASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm4899-201ENSMUST00000178708 719 ntBASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm28043E0CXC2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28043E0CXC2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms