Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.09□□□□□ -0.15
Clip3B9EHT4 Gm18889-201ENSMUST00000174284 929 ntBASIC14.09□□□□□ -0.15
Clip3B9EHT4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.09□□□□□ -0.15
Clip3B9EHT4 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clip3B9EHT4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Clip3B9EHT4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.08□□□□□ -0.16
Clip3B9EHT4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Mir6990-201ENSMUST00000183724 91 ntBASIC14.08□□□□□ -0.16
Clip3B9EHT4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.08□□□□□ -0.16
Clip3B9EHT4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.08□□□□□ -0.16
Clip3B9EHT4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clip3B9EHT4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm18057-201ENSMUST00000208220 503 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm8396-201ENSMUST00000057361 823 ntBASIC14.07□□□□□ -0.16
Clip3B9EHT4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clip3B9EHT4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms