Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12887B1AVM1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.74□□□□□ -0.53
Gm12887B1AVM1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12887B1AVM1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gm29518-201ENSMUST00000190858 372 ntBASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gm12887B1AVM1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms