Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3n-3A0A0G2JEM0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm8344-201ENSMUST00000119813 856 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Acot6-202ENSMUST00000222921 3622 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3n-3A0A0G2JEM0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms