Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav6n-6A0A075B6B2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav6n-6A0A075B6B2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm5864-201ENSMUST00000202263 970 ntBASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Carlr-201ENSMUST00000181515 2574 ntBASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav6n-6A0A075B6B2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms