Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H2afb3S4R1G7 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.1□□□□□ -0.31
H2afb3S4R1G7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Rubie-203ENSMUST00000227803 2430 ntBASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
H2afb3S4R1G7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.09□□□□□ -0.31
H2afb3S4R1G7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
H2afb3S4R1G7 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb3S4R1G7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Gm13036-201ENSMUST00000117799 748 ntBASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Gm18195-201ENSMUST00000207604 706 ntBASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb3S4R1G7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.08□□□□□ -0.32
H2afb3S4R1G7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms