Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Smarcb1Q9Z0H3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.05■□□□□ 0
Smarcb1Q9Z0H3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Gm12882-201ENSMUST00000121696 517 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.05■□□□□ -0
Smarcb1Q9Z0H3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Smarcb1Q9Z0H3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gm23547-201ENSMUST00000158210 271 ntBASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcb1Q9Z0H3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms