Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm6659-201ENSMUST00000174752 547 ntBASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cx3cr1Q9Z0D9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cx3cr1Q9Z0D9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.3□□□□□ -0.44
Cx3cr1Q9Z0D9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms