Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Gm10052-201ENSMUST00000168019 960 ntBASIC16.83■□□□□ 0.28
Trim44Q9QXA7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Gm7729-201ENSMUST00000050143 801 ntBASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim44Q9QXA7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Celf4-206ENSMUST00000224553 1729 ntBASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim44Q9QXA7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim44Q9QXA7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Gm44430-201ENSMUST00000203376 995 ntBASIC16.8■□□□□ 0.28
Trim44Q9QXA7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim44Q9QXA7 Grk6-205ENSMUST00000224653 2976 ntBASIC16.8■□□□□ 0.28
Trim44Q9QXA7 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms