Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sec61a2Q9JLR1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Gm17968-201ENSMUST00000194902 784 ntBASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sec61a2Q9JLR1 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Gm10175-201ENSMUST00000086013 645 ntBASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.1□□□□□ -0.31
Sec61a2Q9JLR1 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms