Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trem1Q9JKE2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Gm13436-201ENSMUST00000120418 567 ntBASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trem1Q9JKE2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trem1Q9JKE2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem1Q9JKE2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms