Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.04■□□□□ -0
Timp4Q9JHB3 Mir6977-201ENSMUST00000184960 64 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 AA619741-201ENSMUST00000195095 646 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.04■□□□□ -0
Timp4Q9JHB3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.04■□□□□ -0
Timp4Q9JHB3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.04■□□□□ -0
Timp4Q9JHB3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Timp4Q9JHB3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Timp4Q9JHB3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.03■□□□□ -0
Timp4Q9JHB3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.03■□□□□ -0
Timp4Q9JHB3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.03■□□□□ -0
Timp4Q9JHB3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.03■□□□□ -0
Timp4Q9JHB3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.03■□□□□ -0
Timp4Q9JHB3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.03■□□□□ -0
Timp4Q9JHB3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Timp4Q9JHB3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.02■□□□□ -0
Timp4Q9JHB3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.02■□□□□ -0
Timp4Q9JHB3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Gm6916-202ENSMUST00000205523 195 ntBASIC15.02■□□□□ -0
Timp4Q9JHB3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Timp4Q9JHB3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Timp4Q9JHB3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Timp4Q9JHB3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.02□□□□□ -0.01
Timp4Q9JHB3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Syt7-204ENSMUST00000223586 1344 ntBASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Timp4Q9JHB3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms