Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.64□□□□□ -0.23
Rtp4Q9ER80 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rtp4Q9ER80 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rtp4Q9ER80 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Mir449b-201ENSMUST00000104833 80 ntBASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rtp4Q9ER80 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rtp4Q9ER80 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rtp4Q9ER80 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms