Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gm23634-201ENSMUST00000175071 91 ntBASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gm29518-201ENSMUST00000190858 372 ntBASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gm18622-201ENSMUST00000219361 595 ntBASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Gm25925-201ENSMUST00000158314 306 ntBASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn3Q9DCB1 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Gm6659-201ENSMUST00000174752 547 ntBASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hmgn3Q9DCB1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.65□□□□□ -0.23
Hmgn3Q9DCB1 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn3Q9DCB1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms