Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cpne8Q9DC53 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cpne8Q9DC53 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm12260-201ENSMUST00000122447 411 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm27525-201ENSMUST00000184465 107 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 AW822252-206ENSMUST00000208904 237 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cpne8Q9DC53 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cpne8Q9DC53 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms