Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm25948-201ENSMUST00000175334 112 ntBASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdc40Q9DC48 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdc40Q9DC48 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cdc40Q9DC48 Gm2272-201ENSMUST00000194903 582 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms