Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp5Q9D7S9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chmp5Q9D7S9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Gm13464-201ENSMUST00000119418 935 ntBASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp5Q9D7S9 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Gm4899-201ENSMUST00000178708 719 ntBASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Matn2-206ENSMUST00000228570 2798 ntBASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.19■□□□□ 0.5
Chmp5Q9D7S9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Ank2-226ENSMUST00000189368 339 ntBASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Gm45779-201ENSMUST00000212189 4064 ntBASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Chmp5Q9D7S9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp5Q9D7S9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms