Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Upk3bl1Q9D701 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Gm15565-201ENSMUST00000118890 427 ntBASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk3bl1Q9D701 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Gm13312-201ENSMUST00000119631 718 ntBASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3bl1Q9D701 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Gm10499-201ENSMUST00000174094 934 ntBASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.23□□□□□ -0.29
Upk3bl1Q9D701 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms