Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.76□□□□□ -0.05
Sf3a3Q9D554 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.75□□□□□ -0.05
Sf3a3Q9D554 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Sf3a3Q9D554 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
Sf3a3Q9D554 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.74□□□□□ -0.05
Sf3a3Q9D554 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.74□□□□□ -0.05
Sf3a3Q9D554 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Gm22240-201ENSMUST00000175225 82 ntBASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sf3a3Q9D554 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms