Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf135Q9CWS1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Gm7063-201ENSMUST00000186840 981 ntBASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Rnf135Q9CWS1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Gm13597-201ENSMUST00000121239 375 ntBASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf135Q9CWS1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf135Q9CWS1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms