Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Pfdn1Q9CWM4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm11336-201ENSMUST00000118168 334 ntBASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm11539-201ENSMUST00000119837 557 ntBASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pfdn1Q9CWM4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Pfdn1Q9CWM4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm27405-201ENSMUST00000184201 112 ntBASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.77□□□□□ -0.37
Pfdn1Q9CWM4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn1Q9CWM4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms