Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Retreg3Q9CQV4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retreg3Q9CQV4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm13365-201ENSMUST00000121188 973 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm27920-201ENSMUST00000183953 96 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm43084-201ENSMUST00000200696 947 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm45166-201ENSMUST00000209073 683 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm45610-201ENSMUST00000209227 784 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retreg3Q9CQV4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retreg3Q9CQV4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Gm23547-201ENSMUST00000158210 271 ntBASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Gm5479-201ENSMUST00000160578 435 ntBASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retreg3Q9CQV4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retreg3Q9CQV4 Gm8502-201ENSMUST00000185708 901 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms