Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 CT009510.1-201ENSMUST00000227972 270 ntBASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Rpl39lQ9CQD0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Rpl39lQ9CQD0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Ankra2-208ENSMUST00000226100 1476 ntBASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Rpl39lQ9CQD0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Rpl39lQ9CQD0 Mir5122-201ENSMUST00000175004 89 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms