Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim33Q99PP7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.43□□□□□ -0.1
Trim33Q99PP7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.43□□□□□ -0.1
Trim33Q99PP7 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.43□□□□□ -0.1
Trim33Q99PP7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.43□□□□□ -0.1
Trim33Q99PP7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim33Q99PP7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.42□□□□□ -0.1
Trim33Q99PP7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gm2213-201ENSMUST00000197485 688 ntBASIC14.42□□□□□ -0.1
Trim33Q99PP7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.42□□□□□ -0.1
Trim33Q99PP7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.42□□□□□ -0.1
Trim33Q99PP7 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim33Q99PP7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim33Q99PP7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms