Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm13464-201ENSMUST00000119418 935 ntBASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Gm45841-201ENSMUST00000207700 164 ntBASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx6-1Q99MA9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Gm28911-201ENSMUST00000188837 117 ntBASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx6-1Q99MA9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Gm27701-201ENSMUST00000184498 110 ntBASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx6-1Q99MA9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx6-1Q99MA9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.58□□□□□ -0.23
Nkx6-1Q99MA9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx6-1Q99MA9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx6-1Q99MA9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nkx6-1Q99MA9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.58□□□□□ -0.24
Nkx6-1Q99MA9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms