Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vmp1Q99KU0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vmp1Q99KU0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.04□□□□□ -0.16
Vmp1Q99KU0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Gm13597-201ENSMUST00000121239 375 ntBASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Gm37935-201ENSMUST00000192012 982 ntBASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmp1Q99KU0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmp1Q99KU0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vmp1Q99KU0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms