Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.04■□□□□ 0.32
Hps4Q99KG7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Gm6916-202ENSMUST00000205523 195 ntBASIC17.04■□□□□ 0.32
Hps4Q99KG7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.04■□□□□ 0.32
Hps4Q99KG7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Hps4Q99KG7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.03■□□□□ 0.32
Hps4Q99KG7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.03■□□□□ 0.32
Hps4Q99KG7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm42612-201ENSMUST00000197986 623 ntBASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm43170-201ENSMUST00000199827 612 ntBASIC17.03■□□□□ 0.32
Hps4Q99KG7 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.03■□□□□ 0.32
Hps4Q99KG7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Hps4Q99KG7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Gm22189-201ENSMUST00000103822 86 ntBASIC17.02■□□□□ 0.32
Hps4Q99KG7 Gm14928-201ENSMUST00000120198 477 ntBASIC17.02■□□□□ 0.32
Hps4Q99KG7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.02■□□□□ 0.32
Hps4Q99KG7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.02■□□□□ 0.32
Hps4Q99KG7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hps4Q99KG7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.02■□□□□ 0.31
Hps4Q99KG7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Hps4Q99KG7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hps4Q99KG7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hps4Q99KG7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hps4Q99KG7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hps4Q99KG7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hps4Q99KG7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms