Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdha9Q91Y11 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Gm9824-201ENSMUST00000178707 561 ntBASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Gm5312-201ENSMUST00000203728 547 ntBASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdha9Q91Y11 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdha9Q91Y11 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdha9Q91Y11 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdha9Q91Y11 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdha9Q91Y11 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms