Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Gm12350-201ENSMUST00000121208 462 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.48□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb4Q91XZ6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Rubie-203ENSMUST00000227803 2430 ntBASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Gm2651-201ENSMUST00000203560 838 ntBASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb4Q91XZ6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb4Q91XZ6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb4Q91XZ6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb4Q91XZ6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb4Q91XZ6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb4Q91XZ6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Gm12008-201ENSMUST00000117791 755 ntBASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb4Q91XZ6 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms