Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.62■□□□□ 0.25
Trex1Q91XB0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.62■□□□□ 0.25
Trex1Q91XB0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trex1Q91XB0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.61■□□□□ 0.25
Trex1Q91XB0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.61■□□□□ 0.25
Trex1Q91XB0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gm15460-201ENSMUST00000118147 391 ntBASIC16.6■□□□□ 0.25
Trex1Q91XB0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.6■□□□□ 0.25
Trex1Q91XB0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gm8515-201ENSMUST00000194852 576 ntBASIC16.6■□□□□ 0.25
Trex1Q91XB0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trex1Q91XB0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.59■□□□□ 0.25
Trex1Q91XB0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Gm12585-201ENSMUST00000117307 290 ntBASIC16.59■□□□□ 0.25
Trex1Q91XB0 Gm12138-201ENSMUST00000122180 951 ntBASIC16.59■□□□□ 0.25
Trex1Q91XB0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.59■□□□□ 0.25
Trex1Q91XB0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.59■□□□□ 0.25
Trex1Q91XB0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.59■□□□□ 0.25
Trex1Q91XB0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trex1Q91XB0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms