Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.39□□□□□ -0.11
Usb1Q91W78 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.39□□□□□ -0.11
Usb1Q91W78 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.39□□□□□ -0.11
Usb1Q91W78 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usb1Q91W78 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usb1Q91W78 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.38□□□□□ -0.11
Usb1Q91W78 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Gm12134-201ENSMUST00000122109 520 ntBASIC14.38□□□□□ -0.11
Usb1Q91W78 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.38□□□□□ -0.11
Usb1Q91W78 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usb1Q91W78 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.37□□□□□ -0.11
Usb1Q91W78 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Gm16198-201ENSMUST00000118766 670 ntBASIC14.37□□□□□ -0.11
Usb1Q91W78 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.37□□□□□ -0.11
Usb1Q91W78 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.37□□□□□ -0.11
Usb1Q91W78 Gm10154-201ENSMUST00000084445 354 ntBASIC14.37□□□□□ -0.11
Usb1Q91W78 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usb1Q91W78 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usb1Q91W78 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usb1Q91W78 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Usb1Q91W78 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usb1Q91W78 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usb1Q91W78 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usb1Q91W78 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usb1Q91W78 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms