Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Gm14057-201ENSMUST00000120631 482 ntBASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Gm24158-201ENSMUST00000175263 71 ntBASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Gm7063-201ENSMUST00000186840 981 ntBASIC16.71■□□□□ 0.27
Ddx41Q91VN6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ddx41Q91VN6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx41Q91VN6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx41Q91VN6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Ddx41Q91VN6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
Ddx41Q91VN6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx41Q91VN6 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Gm20949-201ENSMUST00000206478 952 ntBASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx41Q91VN6 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm2810-201ENSMUST00000118681 990 ntBASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm15483-201ENSMUST00000120338 456 ntBASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx41Q91VN6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm11543-201ENSMUST00000120758 370 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm27430-201ENSMUST00000184585 107 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Gm44333-201ENSMUST00000197168 107 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.68■□□□□ 0.26
Ddx41Q91VN6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.68■□□□□ 0.26
Ddx41Q91VN6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms