Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Rpa1Q8VEE4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Acot6-202ENSMUST00000222921 3622 ntBASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Gm7284-201ENSMUST00000131667 944 ntBASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rpa1Q8VEE4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rpa1Q8VEE4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms