Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.22□□□□□ -0.13
Q8VDP2 Gm18959-201ENSMUST00000208954 655 ntBASIC14.22□□□□□ -0.13
Q8VDP2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Q8VDP2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.22□□□□□ -0.13
Q8VDP2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.22□□□□□ -0.13
Q8VDP2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.22□□□□□ -0.13
Q8VDP2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.22□□□□□ -0.13
Q8VDP2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Q8VDP2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.21□□□□□ -0.13
Q8VDP2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Gm12085-201ENSMUST00000119263 940 ntBASIC14.21□□□□□ -0.13
Q8VDP2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Gm4974-201ENSMUST00000209974 875 ntBASIC14.21□□□□□ -0.13
Q8VDP2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.21□□□□□ -0.13
Q8VDP2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Q8VDP2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q8VDP2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q8VDP2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q8VDP2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q8VDP2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Q8VDP2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.2□□□□□ -0.14
Q8VDP2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Q8VDP2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.2□□□□□ -0.14
Q8VDP2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.2□□□□□ -0.14
Q8VDP2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Q8VDP2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Q8VDP2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.19□□□□□ -0.14
Q8VDP2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Q8VDP2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.19□□□□□ -0.14
Q8VDP2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.19□□□□□ -0.14
Q8VDP2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.19□□□□□ -0.14
Q8VDP2 Gm38027-201ENSMUST00000192315 235 ntBASIC14.19□□□□□ -0.14
Q8VDP2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms