Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ndc1Q8VCB1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ndc1Q8VCB1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Gm15693-201ENSMUST00000120470 637 ntBASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ndc1Q8VCB1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms