Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm1Q8VC85 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm1Q8VC85 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Gm14042-201ENSMUST00000120139 833 ntBASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm1Q8VC85 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.94□□□□□ -0.18
Lsm1Q8VC85 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Thap2-203ENSMUST00000218989 527 ntBASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Lsm1Q8VC85 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm5177-201ENSMUST00000183092 997 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms