Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmc1Q8R4P5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Gm12260-201ENSMUST00000122447 411 ntBASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmc1Q8R4P5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Gm14042-201ENSMUST00000120139 833 ntBASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Gm9726-201ENSMUST00000180321 678 ntBASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmc1Q8R4P5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Gm9727-201ENSMUST00000161387 555 ntBASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Tmc1Q8R4P5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.77■□□□□ 0.43
Tmc1Q8R4P5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Gm13464-201ENSMUST00000119418 935 ntBASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Tmc1Q8R4P5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms