Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nudcd3Q8R1N4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nudcd3Q8R1N4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Gm4535-201ENSMUST00000182274 558 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Gm9682-201ENSMUST00000197505 556 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Gm10355-201ENSMUST00000097146 517 ntBASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nudcd3Q8R1N4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms