Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rtn1Q8K0T0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm23935-201ENSMUST00000102303 57 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm24270-201ENSMUST00000102326 57 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm24245-201ENSMUST00000157318 57 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm38225-201ENSMUST00000194001 393 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rtn1Q8K0T0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rtn1Q8K0T0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn1Q8K0T0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms