Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox30Q8CGW4 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gm27628-201ENSMUST00000184911 107 ntBASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox30Q8CGW4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox30Q8CGW4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Gm5177-201ENSMUST00000183092 997 ntBASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.85■□□□□ 0.13
Sox30Q8CGW4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Thap2-203ENSMUST00000218989 527 ntBASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox30Q8CGW4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms