Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 AW822252-206ENSMUST00000208904 237 ntBASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lrif1Q8CDD9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lrif1Q8CDD9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lrif1Q8CDD9 Acot6-202ENSMUST00000222921 3622 ntBASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lrif1Q8CDD9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms