Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps53Q8CCB4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps53Q8CCB4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps53Q8CCB4 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.89■□□□□ 0.3
Vps53Q8CCB4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm9385-201ENSMUST00000117563 472 ntBASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Gm7774-201ENSMUST00000200064 533 ntBASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps53Q8CCB4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps53Q8CCB4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Gm2272-201ENSMUST00000194903 582 ntBASIC16.88■□□□□ 0.29
Vps53Q8CCB4 Gm18057-201ENSMUST00000208220 503 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms